Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATGGCCCCGCGGCTGCAGC
((((((((((((...((.(((&))).))...)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001350167
GeneSymbolUSP48
Binding site189,211
Score0.846
Seed1
Au0.235
Energy-25.6
Binding len22
Me-6.819
Phylopstem0.2535084166666666
Phylopflank-0.17434236024999988
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure