Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGTCCCCCAGCTGCT
..(((((((.((...(((((.&)))))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181505
GeneSymbolPPP1R1B
Binding site1407,1425
Score0.923
Seed1
Au0.338
Energy-20.3
Binding len18
Me-9.081
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure