Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTTTCCCCAAACTCTTACATCTTAGTGAGCATTGTGTGCTG
....((((((((((((..(((.&.)))..)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_181507
GeneSymbolHPS5
Binding site1113,1156
Score0.846
Seed0
Au0.632
Energy-18.2
Binding len19
Me-9.547
Phylopstem1.4462624333333334
Phylopflank2.1607825425
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure