Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCATACAGAGCAAGAGCACGAGGCCAGCCCCCCAGGAGTCACTAAATGGGAGCCTCAGTGA
((((((((((((((((((....&.)))))))..........)))))))..)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_181508
GeneSymbolHPS5
Binding site3035,3098
Score0.923
Seed1
Au0.412
Energy-25.4
Binding len32
Me-3.938
Phylopstem3.2413437033333334
Phylopflank2.9212165775
Longest consecutive pairings7
Position of longest consecutive pairings24
Pairings in 3prime end4
PositionCDS
2D Structure