Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTTCCTGGAAGATGTTCTGGGGGCCAGC
..((((((((((((((((.(((&)))..)))))))........))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_181508
GeneSymbolHPS5
Binding site601,631
Score0.923
Seed1
Au0.471
Energy-23.5
Binding len30
Me-4.957
Phylopstem-0.09347741666666665
Phylopflank-0.034822521512499996
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure