Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCCGGTTGTATGAAAAGTTTGGGGAGTCT
....((((((((.((((((((.&))))))))...............)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_181508
GeneSymbolHPS5
Binding site2488,2520
Score0.846
Seed0
Au0.574
Energy-21.6
Binding len32
Me-10.836
Phylopstem0.37249825
Phylopflank0.48713400625000003
Longest consecutive pairings8
Position of longest consecutive pairings24
Pairings in 3prime end7
PositionCDS
2D Structure