Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCTGCGTGCTGGGATCCAGCCCACTCCTCATCTTCCATGCCAGGG
.((((((((.((((((((((((&))))))))))..)).........................)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_181521
GeneSymbolCMTM4
Binding site1281,1329
Score0.846
Seed1
Au0.338
Energy-19.6
Binding len48
Me-5.036
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings38
Pairings in 3prime end8
Position3UTR
2D Structure