Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCGTGTGGCCCAGGC
.(((((..(((.((((((....&)))))))))..))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_181521
GeneSymbolCMTM4
Binding site4323,4340
Score0.846
Seed0
Au0.471
Energy-16.8
Binding len17
Me-10.997
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end4
Position3UTR
2D Structure