Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAGAACCACTGCTGCAT
.((((((.(.((((.(.((((&)))).).)))).).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181527
GeneSymbolNAA20
Binding site1050,1071
Score0.897
Seed1
Au0.632
Energy-21.9
Binding len21
Me-8.085
Phylopstem2.250319833333333
Phylopflank0.9847974437499998
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure