Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGGACCAGGCAGCTGCT
..((((((((((((.(.....&).))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181536
GeneSymbolPKD1L3
Binding site370,387
Score1.0
Seed1
Au0.574
Energy-20.6
Binding len17
Me-5.692
Phylopstem0.6842628000000001
Phylopflank1.9510628475000003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure