Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTAGTGGGGGAGCAGGCTTTGGGGCTGGAAACACATGCGGTGTGCCAGGC
.((((((((((.((((......&.))))...)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_181537
GeneSymbolKRT27
Binding site126,177
Score0.923
Seed1
Au0.441
Energy-20.6
Binding len19
Me-7.14
Phylopstem1.1542793
Phylopflank1.7305878125
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure