Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAGCAGCCGGGCTGCAAG
((((((((.(((((((..(((&)))..))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181538
GeneSymbolGJC3
Binding site162,183
Score0.923
Seed1
Au0.382
Energy-26.8
Binding len21
Me-4.994
Phylopstem-0.10421844999999998
Phylopflank0.685625965
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure