Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGCTGACCCGGCACCAACGTTTTGTGCATCGGCTGGAGC
((.((((((((((((((((((&))))))))))))........................)))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330519
GeneSymbolZNF574
Binding site1936,1982
Score1.0
Seed0
Au0.426
Energy-23.7
Binding len46
Me-5.495
Phylopstem0.9246752238095238
Phylopflank0.9810223562500001
Longest consecutive pairings12
Position of longest consecutive pairings34
Pairings in 3prime end8
PositionCDS
2D Structure