Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGCAGCGCCGACACCGAGGAGCCCAAGTC
.((((((((((((((((((...&))))))).............))))))))..))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_181552
GeneSymbolCUX1
Binding site4050,4084
Score0.923
Seed1
Au0.279
Energy-23.7
Binding len34
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure