Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGGACGGCTGGACTATCACAAGGAGCAGGCGGCCCAGCTGCGGA
(((((((((.((((((...((&.))..))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181558
GeneSymbolRFC3
Binding site64,112
Score0.923
Seed1
Au0.397
Energy-23.0
Binding len21
Me-5.18
Phylopstem-0.6112587777777778
Phylopflank0.1991841524999999
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure