Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCGAAGAACCATGGAAAAATATATGTCTACCTGCAGATTGATCTTGTGCTGCAAT
(((((((((((((((((((((&)))))))))..........................)))))............))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181558
GeneSymbolRFC3
Binding site468,528
Score0.872
Seed1
Au0.618
Energy-21.5
Binding len60
Me-3.938
Phylopstem3.7624813084745767
Phylopflank3.5870325025
Longest consecutive pairings9
Position of longest consecutive pairings51
Pairings in 3prime end8
PositionCDS
2D Structure