Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACTCAATAGTCCCCCCAGCTTTGTGTGCTGGT
..(((((((((((.((......&.)).))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_181575
GeneSymbolAUP1
Binding site418,453
Score0.846
Seed1
Au0.412
Energy-16.1
Binding len16
Me-5.814
Phylopstem4.634553909090909
Phylopflank4.136965909875001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure