Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGACAACTTACTCTGGGTCTCTAGGCTTTGGATCCAGCAGCTGCC
..((((((((((.(.((((((&.)))))).).)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181599
GeneSymbolKRTAP13-1
Binding site330,378
Score0.846
Seed1
Au0.397
Energy-24.1
Binding len22
Me-6.982
Phylopstem0.9330787272727273
Phylopflank0.8480044262499999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure