Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGCTGTGGCTATGGCTCCTGCTGTGGCTGTG
..(((((((((((....(((.&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181602
GeneSymbolKRTAP6-1
Binding site111,147
Score0.846
Seed1
Au0.338
Energy-18.1
Binding len16
Me-6.782
Phylopstem-0.312184
Phylopflank0.23361468749999997
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure