Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAAGACGACTTACTCTGGGTCTCTAGGCTTTGGATCCAGCAGCTGCC
..((((((((((.(.((((((&.)))))).).)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181621
GeneSymbolKRTAP13-2
Binding site328,380
Score1.0
Seed1
Au0.397
Energy-24.1
Binding len22
Me-6.982
Phylopstem-0.20540090909090908
Phylopflank0.40474698500000006
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure