Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGAGCTCAGAACTCCTGTTAACATGTCTTACAACTGCAGCTC
....((((((((((((((((.&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181623
GeneSymbolKRTAP15-1
Binding site28,73
Score1.0
Seed0
Au0.544
Energy-25.9
Binding len18
Me-9.547
Phylopstem0.2860706
Phylopflank-0.04408895875000002
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure