Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCACGAGGGAAGTGTACCGCTCCTACCGCCAGCTGCGGA
(((((((((((((.....(((&.)))......))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181642
GeneSymbolSPINT1
Binding site622,664
Score0.846
Seed1
Au0.338
Energy-23.7
Binding len25
Me-5.763
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure