Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACATTTATAGCCCCAGACTGACTTGTAAGCAGCTGCAT
.((((((((((((((((((((&)).)))))))))................))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181643
GeneSymbolPIFO
Binding site1385,1423
Score0.923
Seed1
Au0.574
Energy-23.1
Binding len38
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings26
Pairings in 3prime end8
Position3UTR
2D Structure