Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTATATTCCAGATACAAATGACTCAAAGGCAGCTCAGTT
.((((((((((((((((((((.&))))...))))).............)))).))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_181645
GeneSymbolDEUP1
Binding site2260,2299
Score0.846
Seed1
Au0.647
Energy-18.2
Binding len39
Me-3.793
Phylopstem0.0789200473684211
Phylopflank0.33199653937499995
Longest consecutive pairings5
Position of longest consecutive pairings27
Pairings in 3prime end7
Position3UTR
2D Structure