Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTACGGCCGACAAACCACTCTTCTCTATCAGTATGCC
..(((((((((((((((((..&.))))))))))...................)))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181654
GeneSymbolCPLX4
Binding site1,40
Score0.846
Seed1
Au0.529
Energy-18.1
Binding len39
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings28
Pairings in 3prime end6
Position5UTR
2D Structure