Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGACTCCTCCAGCTGCAAT
(((((((((.((..((.(((.&)))..))..)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181655
GeneSymbolC17orf58
Binding site328,350
Score0.923
Seed1
Au0.456
Energy-20.4
Binding len22
Me-7.326
Phylopstem0.07780592222222221
Phylopflank-0.10793628499999997
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure