Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACAGCCCGGGCTGTAGG
((((((((..((((((..(((&)))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181656
GeneSymbolC17orf58
Binding site437,457
Score0.846
Seed1
Au0.382
Energy-21.8
Binding len20
Me-6.236
Phylopstem1.4334618124999998
Phylopflank0.7945974725
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure