Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTACCAACCGTAGTACTGCT
..(((((((((((((..(((.&)))..)))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181661
GeneSymbolVPS13B
Binding site421,442
Score0.808
Seed1
Au0.559
Energy-20.2
Binding len21
Me-5.19
Phylopstem6.4764057333333325
Phylopflank6.073420790624999
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end5
PositionCDS
2D Structure