Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTATGCCAGA
..((((((((((..........&)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_181671
GeneSymbolPITPNC1
Binding site2235,2246
Score1.0
Seed1
Au0.559
Energy-17.4
Binding len11
Me-8.071
Phylopstem6.45973663
Phylopflank5.382501683749998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure