Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGCAGCCGCCTTGGTAGCAGCGGG
((((.(((((((((((.((((&)))).))))))))......))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181672
GeneSymbolOGT
Binding site578,606
Score1.0
Seed0
Au0.456
Energy-23.2
Binding len28
Me-8.057
Phylopstem0.48965758823529415
Phylopflank0.7956011792500001
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end7
PositionCDS
2D Structure