Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTATTCTGTAGTTGCAGC
((((((((((((..((.((((&)))))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181672
GeneSymbolOGT
Binding site4804,4824
Score1.0
Seed1
Au0.515
Energy-20.1
Binding len20
Me-6.084
Phylopstem0.18698375
Phylopflank0.65957292
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure