Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGCAGCCGCCTTGGTAGCAGCGGG
((((.(((((((((((.((((&)))).))))))))......))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181673
GeneSymbolOGT
Binding site548,576
Score0.846
Seed0
Au0.456
Energy-23.2
Binding len28
Me-8.057
Phylopstem6.117186529411765
Phylopflank5.858063711250001
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end7
PositionCDS
2D Structure