Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTATCCAGCCACACGCCACCATGTGCCACACCAGCTGCT
..(((((((.(((((((((((&))))))..))))).....................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181686
GeneSymbolKRTAP12-1
Binding site17,59
Score0.846
Seed1
Au0.324
Energy-20.4
Binding len42
Me-6.2
Phylopstem0.23871918461538463
Phylopflank-0.5269979953571429
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end8
Position5UTR
2D Structure