Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTTTCACCACGTTGGCCAGGC
.((((((...((((((......&.)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_181698
GeneSymbolCCNY
Binding site4485,4508
Score0.923
Seed1
Au0.515
Energy-16.3
Binding len14
Me-8.406
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure