Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGAGCGCAGCGGTGGATGCAGA
(((((((((((.((((.....&)))).))))))......))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181698
GeneSymbolCCNY
Binding site1536,1559
Score0.846
Seed1
Au0.324
Energy-19.7
Binding len23
Me-7.284
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings12
Pairings in 3prime end3
Position3UTR
2D Structure