Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCCGCCGCGGGCCGCACGGCTGCCGCGGCTGCT
..(((((((((((.((..(((&.))).....)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181701
GeneSymbolQSOX2
Binding site83,119
Score0.923
Seed1
Au0.162
Energy-27.5
Binding len24
Me-5.814
Phylopstem1.7039490909090913
Phylopflank1.7266752425
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure