Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATGTCTGCCGCAGGA
.(((((((.((.((((((....&)))))))).))))..))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_181703
GeneSymbolGJA5
Binding site680,699
Score0.846
Seed1
Au0.397
Energy-16.4
Binding len19
Me-8.197
Phylopstem0.31415166666666666
Phylopflank0.19144848999999997
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end4
PositionCDS
2D Structure