Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGGCTGGAAGAAGATCAGACAGCGATTTGTCAAACCGCGGCAGCAC
.(((.(((((((((.......&.))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181703
GeneSymbolGJA5
Binding site819,869
Score0.923
Seed0
Au0.456
Energy-20.4
Binding len15
Me-8.881
Phylopstem0.49027988888888885
Phylopflank1.0157301774999998
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end1
PositionCDS
2D Structure