Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGAGGCAGAGTGAGCCGAGG
..(((((((((((((((((...&))))))))))......))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_181706
GeneSymbolDNAJC24
Binding site1874,1899
Score0.846
Seed1
Au0.412
Energy-23.4
Binding len25
Me-4.957
Phylopstem0.062334583333333325
Phylopflank0.004524662499999995
Longest consecutive pairings10
Position of longest consecutive pairings15
Pairings in 3prime end5
Position3UTR
2D Structure