Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGGAAGACAGTCTGCCCAAGCTCTGCCATGCATGGGGGCTGCAC
.(((((((.(.(.((((.(((&.))).))))).).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181707
GeneSymbolC17orf64
Binding site579,626
Score0.846
Seed1
Au0.382
Energy-21.6
Binding len21
Me-8.964
Phylopstem-0.8639161857142857
Phylopflank0.31001492249999996
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure