Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGTGGAGCCCCAACCCTGGAAGTGTTACCGGGCAGCTGCAAG
(((((((((((((((...(((&.))).)))))................)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181708
GeneSymbolBCDIN3D
Binding site597,642
Score0.923
Seed1
Au0.397
Energy-24.2
Binding len37
Me-4.171
Phylopstem1.617208632258065
Phylopflank0.6784162225
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure