Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGCCGGCCCAGCCGCTGGTTCACCGCCAGCGTGCAGCTGCAGC
(((((((((((((((...(((&.)))..)))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181709
GeneSymbolRFLNA
Binding site556,604
Score0.846
Seed1
Au0.279
Energy-25.9
Binding len23
Me-4.171
Phylopstem0.45728008749999993
Phylopflank0.142313620625
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure