Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCCCAGAGAGAAGCCC
....((((.(((((((((.((.&)).))))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_181714
GeneSymbolLCA5
Binding site2111,2129
Score0.923
Seed0
Au0.574
Energy-23.5
Binding len18
Me-10.603
Phylopstem-0.427137
Phylopflank-0.031207035000000008
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure