Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTGCCTTCGCAGCCGCCTCCAGTGTTGTACATTATAAACCGGGGCTGCT
..(((((((((((((((((((&.))))).))))))))..........................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181719
GeneSymbolTMCO4
Binding site36,89
Score0.846
Seed1
Au0.441
Energy-26.3
Binding len48
Me-4.957
Phylopstem0.7804327543478261
Phylopflank0.5381388538425926
Longest consecutive pairings8
Position of longest consecutive pairings33
Pairings in 3prime end8
Position5UTR
2D Structure