Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTCACCTCCCCTTAGCGGAGCAGAAACTTGCCAGGTA
((((((((.....(((......&.)))......)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_181721
GeneSymbolFOXR1
Binding site203,242
Score0.846
Seed1
Au0.544
Energy-16.7
Binding len19
Me-13.697
Phylopstem0.060714875000000015
Phylopflank-0.04747642124999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure