Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCTGCATTCAGGCAGCTGCAAC
((((((((((((.((((.(((&))).)))).))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001350220
GeneSymbolSMG7
Binding site5850,5874
Score0.846
Seed1
Au0.559
Energy-22.8
Binding len24
Me-5.227
Phylopstem-0.16306062642857141
Phylopflank0.12020291787500002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure