Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTT
.((((((((((((((.(.((..&)).).))))))))..............)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_181742
GeneSymbolORC4
Binding site5020,5054
Score1.0
Seed1
Au0.485
Energy-19.3
Binding len34
Me-4.026
Phylopstem0.5864491142857142
Phylopflank0.04856934999999999
Longest consecutive pairings8
Position of longest consecutive pairings21
Pairings in 3prime end4
Position3UTR
2D Structure