Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGGGATGAAGCCCACTTGATCATGGTGG
(((((((((.((((((((....&)))))))).)).)))...........)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_181742
GeneSymbolORC4
Binding site5308,5339
Score0.846
Seed1
Au0.5
Energy-19.0
Binding len31
Me-5.18
Phylopstem4.605503002857143
Phylopflank5.10954894875
Longest consecutive pairings8
Position of longest consecutive pairings23
Pairings in 3prime end4
Position3UTR
2D Structure