Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCCCAGCCCTGGGCCCAAGAGGAGGCGGCTGCGGG
(((((((((((((((..(((.&)))..)))))................)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001350234
GeneSymbolPIK3CD
Binding site3452,3489
Score0.846
Seed1
Au0.338
Energy-23.7
Binding len37
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure