Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTCCAGTATTCACCAGGTTTGATAACCCAGCTGCT
..(((((((.((((((.....&.))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181783
GeneSymbolTMTC3
Binding site988,1025
Score0.923
Seed1
Au0.529
Energy-21.2
Binding len15
Me-6.2
Phylopstem5.116872285714286
Phylopflank5.84274421875
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure